Скорее всего тут просто проблема в .htaccess
Вы говорите, что вы пробовали
RewriteCond %{REQUEST_URI} !^/(assets)
RewriteRule ^assets/(.*)$ web/assets/$1 [L]
RewriteRule ^css/(.*)$ web/css/$1 [L]
RewriteRule ^fonts/(.*)$ web/fonts/$1 [L]
RewriteRule ^js/(.*)$ web/js/$1 [L]
RewriteRule ^images/(.*)$ web/images/$1 [L]
RewriteRule (.*) web/$1
Но это для basic шаблона. Вам нужно для advanced
<IfModule mod_rewrite.c>
Options +FollowSymlinks
RewriteEngine On
</IfModule>
<IfModule mod_rewrite.c>
# deal with admin first
RewriteCond %{REQUEST_URI} ^/(admin)
RewriteRule ^admin/assets/(.*)$ backend/web/assets/$1 [L]
RewriteRule ^admin/css/(.*)$ backend/web/css/$1 [L]
RewriteCond %{REQUEST_URI} !^/backend/web/(assets|css)/
RewriteCond %{REQUEST_URI} ^/(admin)
RewriteRule ^.*$ backend/web/index.php [L]
RewriteCond %{REQUEST_URI} ^/(assets|css|js|images)
RewriteRule ^assets/(.*)$ frontend/web/assets/$1 [L]
RewriteRule ^css/(.*)$ frontend/web/css/$1 [L]
RewriteRule ^js/(.*)$ frontend/web/js/$1 [L]
RewriteRule ^images/(.*)$ frontend/web/images/$1 [L]
RewriteRule ^(.*)$ frontend/web/$1 [L]
RewriteCond %{REQUEST_URI} !^/(frontend|backend)/web/(assets|css|js)/
RewriteCond %{REQUEST_URI} !index.php
RewriteCond %{REQUEST_FILENAME} !-f [OR]
RewriteCond %{REQUEST_FILENAME} !-d
RewriteRule ^.*$ frontend/web/index.php
</IfModule>